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Effects of pharmaceuticals on the nitrogen cycle in water and soil: a review

Reza Pashaei, Pari Zahedipour-Sheshglani, Reda Dzingelevičienė, Sajjad Abbasi, Robert M. Rees

Environ Monit Assess. 2022; 194(2): 105. Published online 2022 Jan 19. doi: 10.1007/s10661-022-09754-7

PMCID:: PMC8766359

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Response mechanisms of bacterial communities and nitrogen cycle functional genes in millet rhizosphere soil to chromium stress

Xue Bai, Yvjing Li, Xiuqing Jing, Xiaodong Zhao, Pengyu Zhao

Front Microbiol. 2023; 14: 1116535. Published online 2023 Feb 22. doi: 10.3389/fmicb.2023.1116535

PMCID:: PMC9992798

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Periphytic biofilms-mediated microbial interactions and their impact on the nitrogen cycle in rice paddies

Zhihao Chen, Jan Dolfing, Shunyao Zhuang, Yonghong Wu

Eco Environ Health. 2022 Sep; 1(3): 172–180. Published online 2022 Nov 5. doi: 10.1016/j.eehl.2022.09.004

PMCID:: PMC10702904

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Microbial Nitrogen-Cycle Gene Abundance in Soil of Cropland Abandoned for Different Periods

Huhe, Shinchilelt Borjigin, Buhebaoyin, Yanpei Wu, Minquan Li, Yunxiang Cheng

PLoS One. 2016; 11(5): e0154697. Published online 2016 May 3. doi: 10.1371/journal.pone.0154697

PMCID:: PMC4854452

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The geobiological nitrogen cycle: From microbes to the mantle

A. L. Zerkle, S. Mikhail

Geobiology. 2017 May; 15(3): 343–352. Published online 2017 Feb 3. doi: 10.1111/gbi.12228

PMCID:: PMC5412885

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Lipids as paleomarkers to constrain the marine nitrogen cycle

Darci Rush, Jaap S. Sinninghe Damsté

Environ Microbiol. 2017 Jun; 19(6): 2119–2132. Published online 2017 Feb 28. doi: 10.1111/1462-2920.13682

PMCID:: PMC5516240

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Nitrogen fixation sustained productivity in the wake of the Palaeoproterozoic Great Oxygenation Event

Genming Luo, Christopher K. Junium, Gareth Izon, Shuhei Ono, Nicolas J. Beukes, Thomas J. Algeo, Ying Cui, Shucheng Xie, Roger E. Summons

Nat Commun. 2018; 9: 978. Published online 2018 Mar 7. doi: 10.1038/s41467-018-03361-2

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Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones

Erick Cardenas, Luis H. Orellana, Konstantinos T. Konstantinidis, William W. Mohn

Sci Rep. 2018; 8: 3142. Published online 2018 Feb 16. doi: 10.1038/s41598-018-21197-0

PMCID:: PMC5816661

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Radiation of nitrogen‐metabolizing enzymes across the tree of life tracks environmental transitions in Earth history

Chris Parsons, Eva E. Stüeken, Caleb J. Rosen, Katherine Mateos, Rika E. Anderson

Geobiology. 2021 Jan; 19(1): 18–34. Published online 2020 Oct 27. doi: 10.1111/gbi.12419

PMCID:: PMC7894544

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A chronology of human understanding of the nitrogen cycle

James N. Galloway, Allison M. Leach, Albert Bleeker, Jan Willem Erisman

Philos Trans R Soc Lond B Biol Sci. 2013 Jul 5; 368(1621): 20130120. doi: 10.1098/rstb.2013.0120

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Natural forcing of the North Atlantic nitrogen cycle in the Anthropocene

Xingchen Tony Wang, Anne L. Cohen, Victoria Luu, Haojia Ren, Zhan Su, Gerald H. Haug, Daniel M. Sigman

Proc Natl Acad Sci U S A. 2018 Oct 16; 115(42): 10606–10611. Published online 2018 Oct 1. doi: 10.1073/pnas.1801049115

PMCID:: PMC6196544

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Microorganisms and Their Metabolic Capabilities in the Context of the Biogeochemical Nitrogen Cycle at Extreme Environments

Rosa María Martínez-Espinosa

Int J Mol Sci. 2020 Jun; 21(12): 4228. Published online 2020 Jun 13. doi: 10.3390/ijms21124228

PMCID:: PMC7349289

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Metagenomic Insight Into Patterns and Mechanism of Nitrogen Cycle During Biocrust Succession

Qiong Wang, Yingchun Han, Shubin Lan, Chunxiang Hu

Front Microbiol. 2021; 12: 633428. Published online 2021 Mar 17. doi: 10.3389/fmicb.2021.633428

PMCID:: PMC8009985

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Minimizing the impacts of the ammonia economy on the nitrogen cycle and climate

Matteo B. Bertagni, Robert H. Socolow, John Mark P. Martirez, Emily A. Carter, Chris Greig, Yiguang Ju, Tim Lieuwen, Michael E. Mueller, Sankaran Sundaresan, Rui Wang, Mark A. Zondlo, Amilcare Porporato

Proc Natl Acad Sci U S A. 2023 Nov 14; 120(46): e2311728120. Published online 2023 Nov 6. doi: 10.1073/pnas.2311728120

PMCID:: PMC10655559

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Long-Term Cultivation and Metagenomics Reveal Ecophysiology of Previously Uncultivated Thermophiles Involved in Biogeochemical Nitrogen Cycle

Shingo Kato, Sanae Sakai, Miho Hirai, Eiji Tasumi, Manabu Nishizawa, Katsuhiko Suzuki, Ken Takai

Microbes Environ. 2018 Mar; 33(1): 107–110. Published online 2018 Mar 29. doi: 10.1264/jsme2.ME17165

PMCID:: PMC5877337

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Stability of Aquatic Nitrogen Cycle Under Dramatic Changes of Water and Sediment Inflows to the Three Gorges Reservoir

Lina Pang, Yanxin Sun, Yao Yue, Caiqiong Liu, Chenge An, Tiantian Yang, Xinhua Lu, Quanxi Xu, Jie Mei, Min Liu, Xiaofeng Zhang

Geohealth. 2022 Aug; 6(8): e2022GH000607. Published online 2022 Aug 1. doi: 10.1029/2022GH000607

PMCID:: PMC9376181

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Microbiology of nitrogen cycle in animal manure compost

Koki Maeda, Dai Hanajima, Sakae Toyoda, Naohiro Yoshida, Riki Morioka, Takashi Osada

Microb Biotechnol. 2011 Nov; 4(6): 700–709. Published online 2011 Oct 14. doi: 10.1111/j.1751-7915.2010.00236.x

PMCID:: PMC3815407

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Possible nitrogen fertilization of the early Earth Ocean by microbial continental ecosystems

Christophe Thomazo, Estelle Couradeau, Ferran Garcia-Pichel

Nat Commun. 2018; 9: 2530. Published online 2018 Jun 28. doi: 10.1038/s41467-018-04995-y

PMCID:: PMC6023897

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Bioremediation by Cupriavidus metallidurans Strain MSR33 of Mercury-Polluted Agricultural Soil in a Rotary Drum Bioreactor and Its Effects on Nitrogen Cycle Microorganisms

Guillermo Bravo, Paulina Vega-Celedón, Juan Carlos Gentina, Michael Seeger

Microorganisms. 2020 Dec; 8(12): 1952. Published online 2020 Dec 9. doi: 10.3390/microorganisms8121952

PMCID:: PMC7763483

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Microbial Electrochemical Technologies for Sustainable Nitrogen Removal in Marine and Coastal Environments

María José De La Fuente, Carlos Gallardo-Bustos, Rodrigo De la Iglesia, Ignacio T. Vargas

Int J Environ Res Public Health. 2022 Feb; 19(4): 2411. Published online 2022 Feb 19. doi: 10.3390/ijerph19042411

PMCID:: PMC8875524

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Figure 1Hierarchical plant functional nitrogen allocation for a leaf layer of a tree.

The leaf layer is assigned with a certain amount of plant functional nitrogen (FNA_a) required to support its growth and maintenance. The required plant functional nitrogen includes the functional nitrogen in leaves as well as the functional nitrogen in roots and sapwood, which is used to acquire water and nutrient for photosynthesis and to provide nitrogen for new tissue synthesis using the photosynthetic products. Structural nitrogen is associated with functional nitrogen to build structural components (DNA and cell walls) in tissues of leaves, sapwood and roots. The available functional nitrogen is first divided into growth nitrogen and storage nitrogen. The growth nitrogen is further divided into photosynthetic nitrogen and respiratory nitrogen, with the photosynthetic nitrogen divided into nitrogen for light harvesting and nitrogen for carboxylation (nitrogen in Calvin Cycle enzymes). Finally, nitrogen allocated for light harvesting is divided into nitrogen for light capture (nitrogen in proteins of phosystems I, II and chlorophyll a/b complexes) and nitrogen for electron transport (nitrogen in proteins of thylakoid bioenergetics). The parameter in the parenthesis indicates the proportion of nitrogen invested for its category in the same row.

Toward a Mechanistic Modeling of Nitrogen Limitation on Vegetation Dynamics

PLoS One. 2012;7(5):e37914.
Figure 1

The marine nitrogen cycle. Microorganisms with known biomarkers are indicated next to their transformation pathways. Losses of nitrogen are indicated by red arrows, sources in green. N₂: dinitrogen gas; PON: particulate organic nitrogen; DON: dissolved organic nitrogen; : ammonium; : nitrite; : nitrate. Figure adapted from Arrigo, .

Lipids as paleomarkers to constrain the marine nitrogen cycle

Environ Microbiol. 2017 Jun;19(6):2119-2132.
Fig. 1

Nitrogen cycle process

Effects of pharmaceuticals on the nitrogen cycle in water and soil: a review

Environ Monit Assess. 2022;194(2):105.
Fig. 1.

Simplified reaction scheme illustrating an ammonia/N₂ fuel cycle in which NH₃ is electrochemically oxidized to N₂ and H₂, NH₃ →1/2N₂ + 3/2H₂, with H₂ utilized in a hydrogen/O₂ fuel cell. In a reverse cycle, N₂ is electrochemically reduced to NH₃ by nitrogen fixation (1/2N₂ +3/2H₂O → NH₃ + 3/4O₂). In a complete ammonia fuel cycle, both electrochemical ammonia oxidation and nitrogen fixation would be driven by renewable energy sources.

Homogeneous catalysis for the nitrogen fuel cycle

Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):2794-2795.